Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.79□□□□□ -0.68
Scn1bP97952 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scn1bP97952 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Scn1bP97952 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.78□□□□□ -0.68
Scn1bP97952 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Scn1bP97952 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Gm13123-201ENSMUST00000122173 492 ntBASIC10.78□□□□□ -0.68
Scn1bP97952 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.78□□□□□ -0.68
Scn1bP97952 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.78□□□□□ -0.68
Scn1bP97952 Gm6244-201ENSMUST00000178732 841 ntBASIC10.78□□□□□ -0.68
Scn1bP97952 Proscos-202ENSMUST00000178990 666 ntBASIC10.78□□□□□ -0.68
Scn1bP97952 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.78□□□□□ -0.68
Scn1bP97952 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Scn1bP97952 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.78□□□□□ -0.68
Scn1bP97952 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.78□□□□□ -0.68
Scn1bP97952 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.78□□□□□ -0.68
Scn1bP97952 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Scn1bP97952 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.78□□□□□ -0.68
Scn1bP97952 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.78□□□□□ -0.68
Scn1bP97952 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.78□□□□□ -0.68
Scn1bP97952 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Scn1bP97952 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.78□□□□□ -0.68
Scn1bP97952 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scn1bP97952 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.78□□□□□ -0.68
Scn1bP97952 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scn1bP97952 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.77□□□□□ -0.68
Scn1bP97952 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Scn1bP97952 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Scn1bP97952 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Scn1bP97952 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scn1bP97952 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Scn1bP97952 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scn1bP97952 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scn1bP97952 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.77□□□□□ -0.68
Scn1bP97952 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Scn1bP97952 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Scn1bP97952 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.77□□□□□ -0.69
Scn1bP97952 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Scn1bP97952 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.77□□□□□ -0.69
Scn1bP97952 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.77□□□□□ -0.69
Scn1bP97952 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.77□□□□□ -0.69
Scn1bP97952 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.77□□□□□ -0.69
Scn1bP97952 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.77□□□□□ -0.69
Scn1bP97952 Gm27243-201ENSMUST00000183964 521 ntBASIC10.77□□□□□ -0.69
Scn1bP97952 Gm27892-201ENSMUST00000185017 106 ntBASIC10.77□□□□□ -0.69
Scn1bP97952 Gm43002-201ENSMUST00000200310 155 ntBASIC10.77□□□□□ -0.69
Scn1bP97952 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scn1bP97952 Gm17794-201ENSMUST00000220252 955 ntBASIC10.77□□□□□ -0.69
Scn1bP97952 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms