Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 CT030657.3-201ENSMUST00000222707 1200 ntBASIC8.39□□□□□ -1.07
Rpl39P62892 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC8.39□□□□□ -1.07
Rpl39P62892 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rpl39P62892 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC8.39□□□□□ -1.07
Rpl39P62892 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rpl39P62892 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC8.39□□□□□ -1.07
Rpl39P62892 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Gm44755-201ENSMUST00000207830 2102 ntBASIC8.39□□□□□ -1.07
Rpl39P62892 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Rpl39P62892 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Rpl39P62892 Gm7964-201ENSMUST00000051522 1378 ntBASIC8.38□□□□□ -1.07
Rpl39P62892 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
Rpl39P62892 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Rpl39P62892 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Rpl39P62892 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Rpl39P62892 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Gm14999-201ENSMUST00000121039 624 ntBASIC8.38□□□□□ -1.07
Rpl39P62892 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC8.38□□□□□ -1.07
Rpl39P62892 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Rpl39P62892 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Rpl39P62892 Gm27437-201ENSMUST00000183429 107 ntBASIC8.38□□□□□ -1.07
Rpl39P62892 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Gm7067-201ENSMUST00000207698 1249 ntBASIC8.38□□□□□ -1.07
Rpl39P62892 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC8.38□□□□□ -1.07
Rpl39P62892 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 AC154671.1-201ENSMUST00000228617 1578 ntBASIC8.38□□□□□ -1.07
Rpl39P62892 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Gm17244-201ENSMUST00000192482 3416 ntBASIC8.38□□□□□ -1.07
Rpl39P62892 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl39P62892 Gm43242-201ENSMUST00000199507 1776 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms