Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.54□□□□□ -0.24
Vcam1P29533 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.54□□□□□ -0.24
Vcam1P29533 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Vcam1P29533 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vcam1P29533 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vcam1P29533 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vcam1P29533 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.53□□□□□ -0.24
Vcam1P29533 Gm14071-201ENSMUST00000117817 509 ntBASIC13.53□□□□□ -0.24
Vcam1P29533 Gm11700-201ENSMUST00000119409 403 ntBASIC13.53□□□□□ -0.24
Vcam1P29533 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Vcam1P29533 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Gm29410-201ENSMUST00000188383 694 ntBASIC13.53□□□□□ -0.24
Vcam1P29533 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.53□□□□□ -0.24
Vcam1P29533 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.53□□□□□ -0.24
Vcam1P29533 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.53□□□□□ -0.24
Vcam1P29533 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.53□□□□□ -0.24
Vcam1P29533 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Vcam1P29533 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Vcam1P29533 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Vcam1P29533 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcam1P29533 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vcam1P29533 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Vcam1P29533 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Vcam1P29533 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Vcam1P29533 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vcam1P29533 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.52□□□□□ -0.25
Vcam1P29533 Gm15329-201ENSMUST00000121408 155 ntBASIC13.52□□□□□ -0.25
Vcam1P29533 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.52□□□□□ -0.25
Vcam1P29533 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.52□□□□□ -0.25
Vcam1P29533 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.52□□□□□ -0.25
Vcam1P29533 Gm25492-201ENSMUST00000157383 129 ntBASIC13.52□□□□□ -0.25
Vcam1P29533 Gm3619-201ENSMUST00000219947 775 ntBASIC13.52□□□□□ -0.25
Vcam1P29533 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.52□□□□□ -0.25
Vcam1P29533 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Vcam1P29533 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.52□□□□□ -0.25
Vcam1P29533 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vcam1P29533 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vcam1P29533 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.52□□□□□ -0.25
Vcam1P29533 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vcam1P29533 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.52□□□□□ -0.25
Vcam1P29533 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vcam1P29533 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.52□□□□□ -0.25
Vcam1P29533 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcam1P29533 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.52□□□□□ -0.25
Vcam1P29533 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vcam1P29533 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.51□□□□□ -0.25
Vcam1P29533 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 227.7 ms