Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC9.86□□□□□ -0.83
Col8a2P25318 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Col8a2P25318 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC9.86□□□□□ -0.83
Col8a2P25318 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Col8a2P25318 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Col8a2P25318 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC9.86□□□□□ -0.83
Col8a2P25318 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Col8a2P25318 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.86□□□□□ -0.83
Col8a2P25318 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.86□□□□□ -0.83
Col8a2P25318 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Col8a2P25318 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Col8a2P25318 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Col8a2P25318 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col8a2P25318 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col8a2P25318 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col8a2P25318 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
Col8a2P25318 Gm11941-201ENSMUST00000119904 610 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Gm15566-201ENSMUST00000121130 590 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Gm4726-201ENSMUST00000135604 736 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Gm6019-201ENSMUST00000148369 736 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Col8a2P25318 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Col8a2P25318 Mir3547-201ENSMUST00000175461 88 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Col8a2P25318 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.85□□□□□ -0.83
Col8a2P25318 Gm2965-201ENSMUST00000198365 343 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Gm19287-201ENSMUST00000203190 358 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Gm45113-201ENSMUST00000207518 165 ntBASIC9.85□□□□□ -0.83
Col8a2P25318 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.85□□□□□ -0.83
Col8a2P25318 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.85□□□□□ -0.83
Col8a2P25318 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.85□□□□□ -0.83
Col8a2P25318 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a2P25318 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col8a2P25318 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Col8a2P25318 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a2P25318 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Col8a2P25318 Gm5422-201ENSMUST00000050717 2721 ntBASIC9.84□□□□□ -0.83
Col8a2P25318 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Col8a2P25318 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a2P25318 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a2P25318 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a2P25318 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Col8a2P25318 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a2P25318 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a2P25318 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Col8a2P25318 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a2P25318 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.84□□□□□ -0.83
Col8a2P25318 Gm24891-201ENSMUST00000104391 136 ntBASIC9.84□□□□□ -0.83
Col8a2P25318 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Col8a2P25318 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a2P25318 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC9.84□□□□□ -0.83
Col8a2P25318 Gm14263-201ENSMUST00000117955 746 ntBASIC9.84□□□□□ -0.83
Col8a2P25318 Gm8731-201ENSMUST00000118088 412 ntBASIC9.84□□□□□ -0.83
Col8a2P25318 Gm15207-201ENSMUST00000119259 442 ntBASIC9.84□□□□□ -0.83
Col8a2P25318 Gm13408-201ENSMUST00000119822 798 ntBASIC9.84□□□□□ -0.83
Col8a2P25318 Gm11660-201ENSMUST00000120955 412 ntBASIC9.84□□□□□ -0.83
Col8a2P25318 Gm13935-201ENSMUST00000121859 798 ntBASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms