Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC15.05■□□□□ 0
Ubr1O70481 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubr1O70481 Gm6157-201ENSMUST00000199935 1897 ntBASIC15.05■□□□□ 0
Ubr1O70481 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubr1O70481 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ubr1O70481 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ubr1O70481 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubr1O70481 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.05■□□□□ 0
Ubr1O70481 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ubr1O70481 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ubr1O70481 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC15.05■□□□□ 0
Ubr1O70481 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.05■□□□□ 0
Ubr1O70481 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC15.05■□□□□ 0
Ubr1O70481 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC15.05■□□□□ -0
Ubr1O70481 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ubr1O70481 Gm23612-201ENSMUST00000103823 110 ntBASIC15.05■□□□□ -0
Ubr1O70481 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC15.05■□□□□ -0
Ubr1O70481 Gm22146-201ENSMUST00000157397 288 ntBASIC15.05■□□□□ -0
Ubr1O70481 Gm23576-201ENSMUST00000179918 110 ntBASIC15.05■□□□□ -0
Ubr1O70481 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC15.05■□□□□ -0
Ubr1O70481 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC15.05■□□□□ -0
Ubr1O70481 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Ubr1O70481 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ubr1O70481 Nupl1-206ENSMUST00000225111 2936 ntBASIC15.05■□□□□ -0
Ubr1O70481 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ubr1O70481 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ubr1O70481 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.04■□□□□ -0
Ubr1O70481 Nudt13-207ENSMUST00000224311 1574 ntBASIC15.04■□□□□ -0
Ubr1O70481 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.04■□□□□ -0
Ubr1O70481 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Gm14497-201ENSMUST00000119537 580 ntBASIC15.04■□□□□ -0
Ubr1O70481 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC15.04■□□□□ -0
Ubr1O70481 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC15.04■□□□□ -0
Ubr1O70481 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC15.04■□□□□ -0
Ubr1O70481 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC15.04■□□□□ -0
Ubr1O70481 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Gm2594-201ENSMUST00000214774 742 ntBASIC15.04■□□□□ -0
Ubr1O70481 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC15.04■□□□□ -0
Ubr1O70481 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ubr1O70481 AC156501.1-201ENSMUST00000228219 270 ntBASIC15.04■□□□□ -0
Ubr1O70481 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ubr1O70481 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ubr1O70481 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Ubr1O70481 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ubr1O70481 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ubr1O70481 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC15.03■□□□□ -0
Ubr1O70481 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Gm12453-201ENSMUST00000121981 331 ntBASIC15.03■□□□□ -0
Ubr1O70481 Gm19246-201ENSMUST00000173599 255 ntBASIC15.03■□□□□ -0
Ubr1O70481 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 AC154361.2-201ENSMUST00000224747 943 ntBASIC15.03■□□□□ -0
Ubr1O70481 Gm26670-202ENSMUST00000226862 340 ntBASIC15.03■□□□□ -0
Ubr1O70481 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ubr1O70481 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubr1O70481 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms