Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Gm26286-201ENSMUST00000104166 134 ntBASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Gm5419-201ENSMUST00000119301 527 ntBASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Gm12196-201ENSMUST00000120954 262 ntBASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC9.9□□□□□ -0.82
Ssbp3Q9D032 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Gm25881-201ENSMUST00000157783 103 ntBASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp3Q9D032 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.9□□□□□ -0.83
Ssbp3Q9D032 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.9□□□□□ -0.83
Ssbp3Q9D032 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ssbp3Q9D032 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ssbp3Q9D032 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.9□□□□□ -0.83
Ssbp3Q9D032 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
Ssbp3Q9D032 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ssbp3Q9D032 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Gm11450-201ENSMUST00000121144 333 ntBASIC9.89□□□□□ -0.83
Ssbp3Q9D032 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.89□□□□□ -0.83
Ssbp3Q9D032 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Gm7848-201ENSMUST00000210739 718 ntBASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ssbp3Q9D032 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms