Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.61□□□□□ -0.55
Trim16Q99PP9 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim16Q99PP9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm14109-201ENSMUST00000118814 309 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm27046-201ENSMUST00000182160 463 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm27320-201ENSMUST00000184892 109 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm10312-201ENSMUST00000078515 489 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.6□□□□□ -0.55
Trim16Q99PP9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim16Q99PP9 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Gm17376-201ENSMUST00000166016 84 ntBASIC11.59□□□□□ -0.55
Trim16Q99PP9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Gm19994-201ENSMUST00000217086 586 ntBASIC11.59□□□□□ -0.55
Trim16Q99PP9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.59□□□□□ -0.55
Trim16Q99PP9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Gm9996-201ENSMUST00000070359 913 ntBASIC11.59□□□□□ -0.55
Trim16Q99PP9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim16Q99PP9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms