Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC11.37□□□□□ -0.59
Col12a1Q60847 Mir7051-201ENSMUST00000184167 73 ntBASIC11.37□□□□□ -0.59
Col12a1Q60847 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.37□□□□□ -0.59
Col12a1Q60847 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.37□□□□□ -0.59
Col12a1Q60847 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.37□□□□□ -0.59
Col12a1Q60847 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Gm14176-201ENSMUST00000121302 477 ntBASIC11.37□□□□□ -0.59
Col12a1Q60847 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.37□□□□□ -0.59
Col12a1Q60847 Gm24312-201ENSMUST00000178677 119 ntBASIC11.37□□□□□ -0.59
Col12a1Q60847 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.37□□□□□ -0.59
Col12a1Q60847 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.37□□□□□ -0.59
Col12a1Q60847 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC11.37□□□□□ -0.59
Col12a1Q60847 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col12a1Q60847 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Col12a1Q60847 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col12a1Q60847 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.36□□□□□ -0.59
Col12a1Q60847 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Col12a1Q60847 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Gm14441-201ENSMUST00000121960 540 ntBASIC11.36□□□□□ -0.59
Col12a1Q60847 Mir3091-201ENSMUST00000175086 76 ntBASIC11.36□□□□□ -0.59
Col12a1Q60847 Gm36980-201ENSMUST00000195643 622 ntBASIC11.36□□□□□ -0.59
Col12a1Q60847 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.36□□□□□ -0.59
Col12a1Q60847 Gm5292-201ENSMUST00000073317 580 ntBASIC11.36□□□□□ -0.59
Col12a1Q60847 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Col12a1Q60847 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col12a1Q60847 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.36□□□□□ -0.59
Col12a1Q60847 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC11.36□□□□□ -0.59
Col12a1Q60847 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col12a1Q60847 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col12a1Q60847 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.36□□□□□ -0.59
Col12a1Q60847 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col12a1Q60847 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Defa-ps16-201ENSMUST00000121939 171 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm16228-201ENSMUST00000162286 809 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC11.35□□□□□ -0.59
Col12a1Q60847 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col12a1Q60847 CT009550.1-201ENSMUST00000225750 864 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col12a1Q60847 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col12a1Q60847 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.35□□□□□ -0.59
Col12a1Q60847 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col12a1Q60847 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Col12a1Q60847 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms