Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.96□□□□□ -0.65
Cacna1aP97445 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Gm23272-201ENSMUST00000104053 129 ntBASIC10.96□□□□□ -0.65
Cacna1aP97445 Gm11660-201ENSMUST00000120955 412 ntBASIC10.96□□□□□ -0.65
Cacna1aP97445 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.96□□□□□ -0.65
Cacna1aP97445 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.96□□□□□ -0.65
Cacna1aP97445 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cacna1aP97445 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cacna1aP97445 Gm38007-201ENSMUST00000192187 313 ntBASIC10.96□□□□□ -0.65
Cacna1aP97445 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.96□□□□□ -0.65
Cacna1aP97445 Gm42816-201ENSMUST00000198433 325 ntBASIC10.96□□□□□ -0.65
Cacna1aP97445 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.96□□□□□ -0.65
Cacna1aP97445 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cacna1aP97445 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cacna1aP97445 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cacna1aP97445 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cacna1aP97445 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cacna1aP97445 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.96□□□□□ -0.66
Cacna1aP97445 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cacna1aP97445 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cacna1aP97445 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cacna1aP97445 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cacna1aP97445 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cacna1aP97445 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cacna1aP97445 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cacna1aP97445 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cacna1aP97445 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.96□□□□□ -0.66
Cacna1aP97445 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.96□□□□□ -0.66
Cacna1aP97445 Gm19587-201ENSMUST00000191395 545 ntBASIC10.96□□□□□ -0.66
Cacna1aP97445 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.96□□□□□ -0.66
Cacna1aP97445 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.96□□□□□ -0.66
Cacna1aP97445 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.96□□□□□ -0.66
Cacna1aP97445 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cacna1aP97445 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.96□□□□□ -0.66
Cacna1aP97445 Gm5451-201ENSMUST00000080545 579 ntBASIC10.96□□□□□ -0.66
Cacna1aP97445 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cacna1aP97445 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cacna1aP97445 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.96□□□□□ -0.66
Cacna1aP97445 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.66
Cacna1aP97445 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cacna1aP97445 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cacna1aP97445 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.96□□□□□ -0.66
Cacna1aP97445 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cacna1aP97445 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.95□□□□□ -0.66
Cacna1aP97445 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Gm15004-201ENSMUST00000119192 630 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Gm11783-201ENSMUST00000119549 885 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.95□□□□□ -0.66
Cacna1aP97445 Gm24248-201ENSMUST00000157321 322 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.95□□□□□ -0.66
Cacna1aP97445 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Paupar-201ENSMUST00000194826 3482 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Cacna1aP97445 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Cacna1aP97445 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Gm23680-201ENSMUST00000083162 164 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cacna1aP97445 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cacna1aP97445 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.95□□□□□ -0.66
Cacna1aP97445 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Gm7719-201ENSMUST00000182374 975 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms