Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Fdft1P53798 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Fdft1P53798 Gm12036-201ENSMUST00000120008 530 ntBASIC11.85□□□□□ -0.51
Fdft1P53798 Gm7722-201ENSMUST00000120646 741 ntBASIC11.85□□□□□ -0.51
Fdft1P53798 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.85□□□□□ -0.51
Fdft1P53798 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.85□□□□□ -0.51
Fdft1P53798 Gm27046-201ENSMUST00000182160 463 ntBASIC11.85□□□□□ -0.51
Fdft1P53798 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.85□□□□□ -0.51
Fdft1P53798 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.85□□□□□ -0.51
Fdft1P53798 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.85□□□□□ -0.51
Fdft1P53798 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.85□□□□□ -0.51
Fdft1P53798 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.85□□□□□ -0.51
Fdft1P53798 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Fdft1P53798 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Fdft1P53798 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.85□□□□□ -0.51
Fdft1P53798 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.84□□□□□ -0.51
Fdft1P53798 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.84□□□□□ -0.51
Fdft1P53798 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.84□□□□□ -0.51
Fdft1P53798 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Fdft1P53798 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Fdft1P53798 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.84□□□□□ -0.51
Fdft1P53798 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Fdft1P53798 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Gm14644-201ENSMUST00000116671 647 ntBASIC11.84□□□□□ -0.51
Fdft1P53798 Gm12015-201ENSMUST00000117065 843 ntBASIC11.84□□□□□ -0.51
Fdft1P53798 Gm5070-201ENSMUST00000177599 862 ntBASIC11.84□□□□□ -0.51
Fdft1P53798 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Gm9230-201ENSMUST00000188228 532 ntBASIC11.84□□□□□ -0.51
Fdft1P53798 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.84□□□□□ -0.51
Fdft1P53798 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Fdft1P53798 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.84□□□□□ -0.51
Fdft1P53798 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Fdft1P53798 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Fdft1P53798 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Fdft1P53798 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Fdft1P53798 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fdft1P53798 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Fdft1P53798 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.83□□□□□ -0.52
Fdft1P53798 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Fdft1P53798 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.83□□□□□ -0.52
Fdft1P53798 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Fdft1P53798 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Fdft1P53798 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.83□□□□□ -0.52
Fdft1P53798 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.83□□□□□ -0.52
Fdft1P53798 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms