Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox2P48432 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox2P48432 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox2P48432 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Sox2P48432 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox2P48432 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.07□□□□□ -0.64
Sox2P48432 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox2P48432 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox2P48432 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox2P48432 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox2P48432 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sox2P48432 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox2P48432 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Sox2P48432 Gm12490-201ENSMUST00000120255 560 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Gm15610-201ENSMUST00000120584 195 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Gm14441-201ENSMUST00000121960 540 ntBASIC11.06□□□□□ -0.64
Sox2P48432 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.06□□□□□ -0.64
Sox2P48432 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.06□□□□□ -0.64
Sox2P48432 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Gm25261-201ENSMUST00000157416 134 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Gm24548-201ENSMUST00000158650 108 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.06□□□□□ -0.64
Sox2P48432 Gm28882-201ENSMUST00000185504 314 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Gm43002-201ENSMUST00000200310 155 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sox2P48432 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.06□□□□□ -0.64
Sox2P48432 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox2P48432 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox2P48432 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Sox2P48432 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.06□□□□□ -0.64
Sox2P48432 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox2P48432 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox2P48432 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.06□□□□□ -0.64
Sox2P48432 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.05□□□□□ -0.64
Sox2P48432 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.05□□□□□ -0.64
Sox2P48432 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sox2P48432 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sox2P48432 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.05□□□□□ -0.64
Sox2P48432 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.05□□□□□ -0.64
Sox2P48432 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.05□□□□□ -0.64
Sox2P48432 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.05□□□□□ -0.64
Sox2P48432 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sox2P48432 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms