Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC8.55□□□□□ -1.04
TtrP07309 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
TtrP07309 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
TtrP07309 AC107453.4-201ENSMUST00000227068 1817 ntBASIC8.55□□□□□ -1.04
TtrP07309 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
TtrP07309 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Gm24934-201ENSMUST00000103764 111 ntBASIC8.55□□□□□ -1.04
TtrP07309 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC8.55□□□□□ -1.04
TtrP07309 Gm15172-201ENSMUST00000118945 1046 ntBASIC8.55□□□□□ -1.04
TtrP07309 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
TtrP07309 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC8.55□□□□□ -1.04
TtrP07309 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC8.55□□□□□ -1.04
TtrP07309 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
TtrP07309 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC8.55□□□□□ -1.04
TtrP07309 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.55□□□□□ -1.04
TtrP07309 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC8.55□□□□□ -1.04
TtrP07309 Gm18584-201ENSMUST00000203098 964 ntBASIC8.55□□□□□ -1.04
TtrP07309 Gm44913-201ENSMUST00000208060 2990 ntBASIC8.55□□□□□ -1.04
TtrP07309 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC8.55□□□□□ -1.04
TtrP07309 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.55□□□□□ -1.04
TtrP07309 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.55□□□□□ -1.04
TtrP07309 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
TtrP07309 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
TtrP07309 Gm36987-201ENSMUST00000194704 2979 ntBASIC8.55□□□□□ -1.04
TtrP07309 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TtrP07309 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 Gm45191-201ENSMUST00000205846 5439 ntBASIC8.54□□□□□ -1.04
TtrP07309 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC8.54□□□□□ -1.04
TtrP07309 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Gm26927-201ENSMUST00000182385 965 ntBASIC8.54□□□□□ -1.04
TtrP07309 Gm27892-201ENSMUST00000185017 106 ntBASIC8.54□□□□□ -1.04
TtrP07309 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
TtrP07309 Gm18711-201ENSMUST00000199341 750 ntBASIC8.54□□□□□ -1.04
TtrP07309 CT030657.3-201ENSMUST00000222707 1200 ntBASIC8.54□□□□□ -1.04
TtrP07309 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TtrP07309 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC8.54□□□□□ -1.04
TtrP07309 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TtrP07309 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
TtrP07309 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TtrP07309 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 1239.6 ms