Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.01□□□□□ -0.33
Trdmt1O55055 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Gm13600-201ENSMUST00000117949 744 ntBASIC13.01□□□□□ -0.33
Trdmt1O55055 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.01□□□□□ -0.33
Trdmt1O55055 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.01□□□□□ -0.33
Trdmt1O55055 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.01□□□□□ -0.33
Trdmt1O55055 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.01□□□□□ -0.33
Trdmt1O55055 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdmt1O55055 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trdmt1O55055 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13□□□□□ -0.33
Trdmt1O55055 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Gm18642-201ENSMUST00000206642 1400 ntBASIC13□□□□□ -0.33
Trdmt1O55055 Gm17213-201ENSMUST00000165161 1360 ntBASIC13□□□□□ -0.33
Trdmt1O55055 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trdmt1O55055 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13□□□□□ -0.33
Trdmt1O55055 Gm12247-201ENSMUST00000117585 670 ntBASIC13□□□□□ -0.33
Trdmt1O55055 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Gm11422-201ENSMUST00000118925 1103 ntBASIC13□□□□□ -0.33
Trdmt1O55055 Gm13117-201ENSMUST00000120894 691 ntBASIC13□□□□□ -0.33
Trdmt1O55055 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13□□□□□ -0.33
Trdmt1O55055 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13□□□□□ -0.33
Trdmt1O55055 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13□□□□□ -0.33
Trdmt1O55055 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13□□□□□ -0.33
Trdmt1O55055 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13□□□□□ -0.33
Trdmt1O55055 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13□□□□□ -0.33
Trdmt1O55055 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13□□□□□ -0.33
Trdmt1O55055 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13□□□□□ -0.33
Trdmt1O55055 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13□□□□□ -0.33
Trdmt1O55055 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trdmt1O55055 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trdmt1O55055 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trdmt1O55055 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.99□□□□□ -0.33
Trdmt1O55055 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms