Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ccdc180J3QNE4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Gm24791-201ENSMUST00000104284 131 ntBASIC21.27■■□□□ 1
Ccdc180J3QNE4 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Gm43163-201ENSMUST00000196571 442 ntBASIC21.27■■□□□ 1
Ccdc180J3QNE4 Gm42430-201ENSMUST00000197209 616 ntBASIC21.27■■□□□ 1
Ccdc180J3QNE4 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Ccdc180J3QNE4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc180J3QNE4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc180J3QNE4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC21.27■□□□□ 0.99
Ccdc180J3QNE4 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc180J3QNE4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc180J3QNE4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc180J3QNE4 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc180J3QNE4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc180J3QNE4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Gm9369-201ENSMUST00000196009 733 ntBASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Gm10728-201ENSMUST00000194292 1829 ntBASIC21.26■□□□□ 0.99
Ccdc180J3QNE4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Gm42655-201ENSMUST00000202782 1134 ntBASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Gm7525-201ENSMUST00000219425 454 ntBASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Gm19046-201ENSMUST00000221263 1298 ntBASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 AC159002.1-201ENSMUST00000226714 924 ntBASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc180J3QNE4 Gm11560-201ENSMUST00000117567 948 ntBASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 AC159376.1-201ENSMUST00000218504 630 ntBASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm13722-201ENSMUST00000117964 3066 ntBASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc180J3QNE4 Gm11979-201ENSMUST00000119629 743 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms