Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm4768-201ENSMUST00000206199 686 ntBASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 AC132863.2-201ENSMUST00000226643 799 ntBASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 AC154537.1-201ENSMUST00000226101 1304 ntBASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav7n-4A0A075B620 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gm9796-201ENSMUST00000062249 2250 ntBASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gm5706-201ENSMUST00000181525 993 ntBASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gm27989-201ENSMUST00000184721 107 ntBASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Igkv2-116-201ENSMUST00000199327 362 ntBASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gm5781-201ENSMUST00000219792 443 ntBASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gm37368-201ENSMUST00000193173 3212 ntBASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav7n-4A0A075B620 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Gm8155-201ENSMUST00000216363 1612 ntBASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Ldb3-207ENSMUST00000227819 1499 ntBASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Gm19327-201ENSMUST00000220651 3271 ntBASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Gm18782-201ENSMUST00000209023 1399 ntBASIC8.91□□□□□ -0.98
Trav7n-4A0A075B620 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms