Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Mir744-201ENSMUST00000103261 100 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm11500-201ENSMUST00000118237 601 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm25677-201ENSMUST00000174983 72 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm38151-201ENSMUST00000195085 289 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm37826-201ENSMUST00000195329 322 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm23105-201ENSMUST00000083719 134 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Crlf1Q9JM58 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Crlf1Q9JM58 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Crlf1Q9JM58 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Crlf1Q9JM58 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Crlf1Q9JM58 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Crlf1Q9JM58 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Crlf1Q9JM58 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Crlf1Q9JM58 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.88
Crlf1Q9JM58 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC9.52□□□□□ -0.88
Crlf1Q9JM58 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Gm11783-201ENSMUST00000119549 885 ntBASIC9.52□□□□□ -0.89
Crlf1Q9JM58 Gm14034-201ENSMUST00000120147 551 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms