Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trim8Q99PJ2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim8Q99PJ2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim8Q99PJ2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gm4986-201ENSMUST00000119731 549 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gm42693-201ENSMUST00000196779 631 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gm17931-201ENSMUST00000208132 634 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Snora73a-201ENSMUST00000082453 205 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.64□□□□□ -0.55
Trim8Q99PJ2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.63□□□□□ -0.55
Trim8Q99PJ2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trim8Q99PJ2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 148.7 ms