Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.45□□□□□ -0.74
Scrt1Q99M85 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm5455-201ENSMUST00000058710 715 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.44□□□□□ -0.74
Scrt1Q99M85 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm11509-201ENSMUST00000117358 325 ntBASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm11246-201ENSMUST00000120880 345 ntBASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm27910-201ENSMUST00000185004 107 ntBASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm10288-201ENSMUST00000084614 537 ntBASIC10.44□□□□□ -0.74
Scrt1Q99M85 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.44□□□□□ -0.74
Scrt1Q99M85 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Scrt1Q99M85 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm14585-201ENSMUST00000120713 634 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm13937-201ENSMUST00000121000 988 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 Mir1901-201ENSMUST00000122616 78 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms