Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Gm22920-201ENSMUST00000102175 109 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Gm24844-201ENSMUST00000158679 127 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Gm8459-201ENSMUST00000162504 760 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Gm7467-201ENSMUST00000185173 652 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Gm38314-201ENSMUST00000195709 625 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubr7Q8BU04 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gm15352-201ENSMUST00000118696 270 ntBASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gm11960-201ENSMUST00000122068 925 ntBASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gm9550-201ENSMUST00000161130 862 ntBASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gm10807-201ENSMUST00000177134 795 ntBASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gm45770-201ENSMUST00000212105 616 ntBASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.97□□□□□ -0.49
Ubr7Q8BU04 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubr7Q8BU04 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubr7Q8BU04 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms