Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm12165-201ENSMUST00000117047 342 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm10051-201ENSMUST00000145209 414 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm24514-201ENSMUST00000174961 285 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm37246-201ENSMUST00000192665 835 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm4607-201ENSMUST00000206649 577 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Ntng1-201ENSMUST00000051253 327 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm23251-201ENSMUST00000103773 110 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm13408-201ENSMUST00000119822 798 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm13935-201ENSMUST00000121859 798 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm9550-201ENSMUST00000161130 862 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm27390-201ENSMUST00000184516 176 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm3332-201ENSMUST00000189337 928 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm44882-201ENSMUST00000205702 802 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Gm19324-201ENSMUST00000213229 1169 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc46a1Q6PEM8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms