Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm28646-201ENSMUST00000188220 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm28205-201ENSMUST00000189177 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm29032-201ENSMUST00000189797 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm28695-201ENSMUST00000190300 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm37448-201ENSMUST00000192795 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
ClpbQ60649 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.42□□□□□ -0.58
ClpbQ60649 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.42□□□□□ -0.58
ClpbQ60649 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.42□□□□□ -0.58
ClpbQ60649 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
ClpbQ60649 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
ClpbQ60649 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
ClpbQ60649 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
ClpbQ60649 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Gm23912-201ENSMUST00000104687 87 ntBASIC11.41□□□□□ -0.58
ClpbQ60649 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
ClpbQ60649 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
ClpbQ60649 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.41□□□□□ -0.58
ClpbQ60649 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
ClpbQ60649 Gm27341-201ENSMUST00000183570 106 ntBASIC11.41□□□□□ -0.58
ClpbQ60649 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.41□□□□□ -0.58
ClpbQ60649 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
ClpbQ60649 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
ClpbQ60649 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
ClpbQ60649 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClpbQ60649 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.41□□□□□ -0.58
ClpbQ60649 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.41□□□□□ -0.58
ClpbQ60649 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.4□□□□□ -0.58
ClpbQ60649 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
ClpbQ60649 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Mir3102-201ENSMUST00000175555 104 ntBASIC11.4□□□□□ -0.58
ClpbQ60649 Gm16505-201ENSMUST00000179981 232 ntBASIC11.4□□□□□ -0.58
ClpbQ60649 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.4□□□□□ -0.58
ClpbQ60649 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 Gm18753-201ENSMUST00000201000 566 ntBASIC11.4□□□□□ -0.58
ClpbQ60649 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.4□□□□□ -0.58
ClpbQ60649 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms