Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.83□□□□□ -0.68
Scn1bP97952 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Scn1bP97952 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.82□□□□□ -0.68
Scn1bP97952 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.82□□□□□ -0.68
Scn1bP97952 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Scn1bP97952 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Scn1bP97952 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Scn1bP97952 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.82□□□□□ -0.68
Scn1bP97952 Gm13369-201ENSMUST00000119442 987 ntBASIC10.82□□□□□ -0.68
Scn1bP97952 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Gm26185-201ENSMUST00000157692 266 ntBASIC10.82□□□□□ -0.68
Scn1bP97952 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.82□□□□□ -0.68
Scn1bP97952 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.82□□□□□ -0.68
Scn1bP97952 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Gm5356-201ENSMUST00000093326 615 ntBASIC10.82□□□□□ -0.68
Scn1bP97952 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Scn1bP97952 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Scn1bP97952 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Scn1bP97952 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scn1bP97952 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.81□□□□□ -0.68
Scn1bP97952 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Scn1bP97952 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Scn1bP97952 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.81□□□□□ -0.68
Scn1bP97952 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm7287-201ENSMUST00000205267 602 ntBASIC10.81□□□□□ -0.68
Scn1bP97952 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.81□□□□□ -0.68
Scn1bP97952 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.81□□□□□ -0.68
Scn1bP97952 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.81□□□□□ -0.68
Scn1bP97952 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.81□□□□□ -0.68
Scn1bP97952 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.81□□□□□ -0.68
Scn1bP97952 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.81□□□□□ -0.68
Scn1bP97952 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.81□□□□□ -0.68
Scn1bP97952 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scn1bP97952 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.81□□□□□ -0.68
Scn1bP97952 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Scn1bP97952 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scn1bP97952 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms