Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.82□□□□□ -0.84
Nkx2-1P50220 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nkx2-1P50220 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.81□□□□□ -0.84
Nkx2-1P50220 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 Gm5904-201ENSMUST00000210286 865 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 Gm45925-201ENSMUST00000218882 744 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.81□□□□□ -0.84
Nkx2-1P50220 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nkx2-1P50220 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.8□□□□□ -0.84
Nkx2-1P50220 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.8□□□□□ -0.84
Nkx2-1P50220 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.8□□□□□ -0.84
Nkx2-1P50220 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.8□□□□□ -0.84
Nkx2-1P50220 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nkx2-1P50220 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms