Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cbx3P23198 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.8□□□□□ -0.68
Cbx3P23198 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.8□□□□□ -0.68
Cbx3P23198 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.8□□□□□ -0.68
Cbx3P23198 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.8□□□□□ -0.68
Cbx3P23198 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.8□□□□□ -0.68
Cbx3P23198 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.8□□□□□ -0.68
Cbx3P23198 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.8□□□□□ -0.68
Cbx3P23198 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cbx3P23198 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.8□□□□□ -0.68
Cbx3P23198 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Btrc-206ENSMUST00000224102 3037 ntBASIC10.8□□□□□ -0.68
Cbx3P23198 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Cbx3P23198 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.8□□□□□ -0.68
Cbx3P23198 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.79□□□□□ -0.68
Cbx3P23198 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cbx3P23198 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cbx3P23198 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.79□□□□□ -0.68
Cbx3P23198 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.79□□□□□ -0.68
Cbx3P23198 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.79□□□□□ -0.68
Cbx3P23198 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cbx3P23198 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Cbx3P23198 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.79□□□□□ -0.68
Cbx3P23198 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.79□□□□□ -0.68
Cbx3P23198 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Cbx3P23198 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.79□□□□□ -0.68
Cbx3P23198 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.79□□□□□ -0.68
Cbx3P23198 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.79□□□□□ -0.68
Cbx3P23198 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.79□□□□□ -0.68
Cbx3P23198 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.79□□□□□ -0.68
Cbx3P23198 Gm26315-201ENSMUST00000083890 321 ntBASIC10.79□□□□□ -0.68
Cbx3P23198 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Cbx3P23198 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Cbx3P23198 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.79□□□□□ -0.68
Cbx3P23198 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC10.79□□□□□ -0.68
Cbx3P23198 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cbx3P23198 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cbx3P23198 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Gm44798-201ENSMUST00000208123 2410 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms