Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.33□□□□□ -0.76
UbbP0CG49 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
UbbP0CG49 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.33□□□□□ -0.76
UbbP0CG49 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.32□□□□□ -0.76
UbbP0CG49 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
UbbP0CG49 Gm14247-201ENSMUST00000120950 237 ntBASIC10.32□□□□□ -0.76
UbbP0CG49 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.32□□□□□ -0.76
UbbP0CG49 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.32□□□□□ -0.76
UbbP0CG49 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.32□□□□□ -0.76
UbbP0CG49 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
UbbP0CG49 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.32□□□□□ -0.76
UbbP0CG49 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
UbbP0CG49 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UbbP0CG49 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UbbP0CG49 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.31□□□□□ -0.76
UbbP0CG49 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
UbbP0CG49 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
UbbP0CG49 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.31□□□□□ -0.76
UbbP0CG49 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.31□□□□□ -0.76
UbbP0CG49 Gm40466-201ENSMUST00000212174 422 ntBASIC10.31□□□□□ -0.76
UbbP0CG49 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.31□□□□□ -0.76
UbbP0CG49 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.31□□□□□ -0.76
UbbP0CG49 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
UbbP0CG49 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
UbbP0CG49 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.31□□□□□ -0.76
UbbP0CG49 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.31□□□□□ -0.76
UbbP0CG49 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UbbP0CG49 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.31□□□□□ -0.76
UbbP0CG49 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
UbbP0CG49 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.31□□□□□ -0.76
UbbP0CG49 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms