Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Gm8566-201ENSMUST00000120174 465 ntBASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Gm14247-201ENSMUST00000120950 237 ntBASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Gm2965-201ENSMUST00000198365 343 ntBASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Gm6905-201ENSMUST00000205729 511 ntBASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh17E9PXF0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Pcdh17E9PXF0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Pcdh17E9PXF0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Gm8199-201ENSMUST00000121323 823 ntBASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Gm9630-201ENSMUST00000178304 885 ntBASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Gm5051-201ENSMUST00000204085 485 ntBASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Ginm1-202ENSMUST00000065124 300 ntBASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Gm10288-201ENSMUST00000084614 537 ntBASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms