Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 AC134312.5-201ENST00000568031 1313 ntBASIC15.03■□□□□ -0
CCDC162PA2VCL2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 AC012441.1-201ENST00000446669 685 ntBASIC15.03■□□□□ -0
CCDC162PA2VCL2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 RN7SL837P-201ENST00000463010 287 ntBASIC15.03■□□□□ -0
CCDC162PA2VCL2 RN7SL752P-201ENST00000463779 287 ntBASIC15.03■□□□□ -0
CCDC162PA2VCL2 RN7SL692P-201ENST00000464677 288 ntBASIC15.03■□□□□ -0
CCDC162PA2VCL2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 AC027307.3-201ENST00000594262 1100 ntBASIC15.03■□□□□ -0
CCDC162PA2VCL2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCDC162PA2VCL2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC162PA2VCL2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 AC113367.3-201ENST00000508316 1912 ntBASIC15.02■□□□□ -0
CCDC162PA2VCL2 AC015656.1-201ENST00000624209 3578 ntBASIC15.02■□□□□ -0
CCDC162PA2VCL2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC162PA2VCL2 AP005018.1-201ENST00000525475 301 ntBASIC15.02■□□□□ -0
CCDC162PA2VCL2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 PTP4A1P2-201ENST00000546033 454 ntBASIC15.02■□□□□ -0
CCDC162PA2VCL2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 MIR3197-201ENST00000582241 73 ntBASIC15.02■□□□□ -0
CCDC162PA2VCL2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.02■□□□□ -0
CCDC162PA2VCL2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 OR2I1P-210ENST00000642037 4691 ntBASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 AC139749.1-202ENST00000617529 3139 ntBASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC162PA2VCL2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms