Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm15744-201ENSMUST00000161734 213 ntBASIC11.79□□□□□ -0.52
Vsx1Q91V10 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm4862-201ENSMUST00000170405 438 ntBASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm21092-201ENSMUST00000178995 955 ntBASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.79□□□□□ -0.52
Vsx1Q91V10 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.79□□□□□ -0.52
Vsx1Q91V10 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm25063-201ENSMUST00000104666 94 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm43610-201ENSMUST00000199117 365 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm18463-201ENSMUST00000207258 474 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm8894-201ENSMUST00000074642 666 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.78□□□□□ -0.52
Vsx1Q91V10 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.78□□□□□ -0.52
Vsx1Q91V10 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx1Q91V10 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vsx1Q91V10 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Gm11511-201ENSMUST00000118146 540 ntBASIC11.77□□□□□ -0.53
Vsx1Q91V10 Gm5257-201ENSMUST00000121823 790 ntBASIC11.77□□□□□ -0.53
Vsx1Q91V10 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.77□□□□□ -0.53
Vsx1Q91V10 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.77□□□□□ -0.53
Vsx1Q91V10 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms