Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Gm6023-201ENSMUST00000118217 606 ntBASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28aQ8CEI3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Gm24845-201ENSMUST00000158034 109 ntBASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Gm27731-201ENSMUST00000185192 107 ntBASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28aQ8CEI3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms