Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gm10146-201ENSMUST00000072739 309 ntBASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Tsen54Q8C2A2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Gm14921-201ENSMUST00000118643 908 ntBASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Gm26185-201ENSMUST00000157692 266 ntBASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tsen54Q8C2A2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Gm1335-201ENSMUST00000121653 386 ntBASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Gm26927-201ENSMUST00000182385 965 ntBASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.95□□□□□ -0.82
Tsen54Q8C2A2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms