Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.77□□□□□ -0.2
Nup98Q6PFD9 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Gm9673-201ENSMUST00000119287 781 ntBASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nup98Q6PFD9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm12990-201ENSMUST00000120372 468 ntBASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm3828-201ENSMUST00000121817 257 ntBASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm18514-201ENSMUST00000218980 436 ntBASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm25880-201ENSMUST00000104331 132 ntBASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm3329-201ENSMUST00000159873 556 ntBASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup98Q6PFD9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Gm25053-201ENSMUST00000103982 133 ntBASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Gm25922-201ENSMUST00000104281 130 ntBASIC13.75□□□□□ -0.21
Nup98Q6PFD9 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Gm24679-201ENSMUST00000158762 111 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms