Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.03□□□□□ -0.48
Bdp1Q571C7 Gm14165-201ENSMUST00000121456 952 ntBASIC12.03□□□□□ -0.48
Bdp1Q571C7 Gm11736-201ENSMUST00000121468 505 ntBASIC12.03□□□□□ -0.48
Bdp1Q571C7 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Mir6359-201ENSMUST00000183668 81 ntBASIC12.03□□□□□ -0.48
Bdp1Q571C7 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.03□□□□□ -0.48
Bdp1Q571C7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Bdp1Q571C7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Bdp1Q571C7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Bdp1Q571C7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Bdp1Q571C7 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.02□□□□□ -0.48
Bdp1Q571C7 Gm25492-201ENSMUST00000157383 129 ntBASIC12.02□□□□□ -0.48
Bdp1Q571C7 Gm5291-201ENSMUST00000201965 899 ntBASIC12.02□□□□□ -0.48
Bdp1Q571C7 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Bdp1Q571C7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Bdp1Q571C7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Bdp1Q571C7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Bdp1Q571C7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Bdp1Q571C7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.02□□□□□ -0.49
Bdp1Q571C7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Gm12389-201ENSMUST00000117696 418 ntBASIC12.02□□□□□ -0.49
Bdp1Q571C7 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.02□□□□□ -0.49
Bdp1Q571C7 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Capsl-202ENSMUST00000226688 739 ntBASIC12.02□□□□□ -0.49
Bdp1Q571C7 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.02□□□□□ -0.49
Bdp1Q571C7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.02□□□□□ -0.49
Bdp1Q571C7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bdp1Q571C7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Mir1190-201ENSMUST00000116925 96 ntBASIC12.01□□□□□ -0.49
Bdp1Q571C7 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Gm5040-201ENSMUST00000218609 800 ntBASIC12.01□□□□□ -0.49
Bdp1Q571C7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.01□□□□□ -0.49
Bdp1Q571C7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.01□□□□□ -0.49
Bdp1Q571C7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bdp1Q571C7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12□□□□□ -0.49
Bdp1Q571C7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bdp1Q571C7 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Bdp1Q571C7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms