Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Gm37666-201ENSMUST00000194110 866 ntBASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 AC132384.10-201ENSMUST00000217862 1204 ntBASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem40Q4FJU9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm15131-201ENSMUST00000119124 595 ntBASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm13408-201ENSMUST00000119822 798 ntBASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm13935-201ENSMUST00000121859 798 ntBASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm25318-201ENSMUST00000122554 314 ntBASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm9555-201ENSMUST00000200908 583 ntBASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Tmem40Q4FJU9 Gm42683-201ENSMUST00000196136 2328 ntBASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Gm37863-201ENSMUST00000194911 1457 ntBASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tmem40Q4FJU9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms