Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.47□□□□□ -0.25
GabpaQ00422 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
GabpaQ00422 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.47□□□□□ -0.25
GabpaQ00422 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
GabpaQ00422 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.47□□□□□ -0.25
GabpaQ00422 Gm12899-201ENSMUST00000120565 551 ntBASIC13.47□□□□□ -0.25
GabpaQ00422 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
GabpaQ00422 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.47□□□□□ -0.25
GabpaQ00422 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.47□□□□□ -0.25
GabpaQ00422 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
GabpaQ00422 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.47□□□□□ -0.25
GabpaQ00422 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GabpaQ00422 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GabpaQ00422 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.46□□□□□ -0.25
GabpaQ00422 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.46□□□□□ -0.25
GabpaQ00422 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
GabpaQ00422 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
GabpaQ00422 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
GabpaQ00422 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Gm12419-201ENSMUST00000116649 636 ntBASIC13.46□□□□□ -0.25
GabpaQ00422 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.46□□□□□ -0.25
GabpaQ00422 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
GabpaQ00422 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
GabpaQ00422 Gm10807-201ENSMUST00000177134 795 ntBASIC13.46□□□□□ -0.25
GabpaQ00422 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.46□□□□□ -0.25
GabpaQ00422 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Gm6114-201ENSMUST00000182472 968 ntBASIC13.46□□□□□ -0.25
GabpaQ00422 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.46□□□□□ -0.25
GabpaQ00422 Gm9645-201ENSMUST00000197131 792 ntBASIC13.46□□□□□ -0.25
GabpaQ00422 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GabpaQ00422 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.46□□□□□ -0.25
GabpaQ00422 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
GabpaQ00422 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
GabpaQ00422 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
GabpaQ00422 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
GabpaQ00422 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Gm7150-201ENSMUST00000122032 981 ntBASIC13.45□□□□□ -0.26
GabpaQ00422 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.45□□□□□ -0.26
GabpaQ00422 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.45□□□□□ -0.26
GabpaQ00422 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.45□□□□□ -0.26
GabpaQ00422 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.45□□□□□ -0.26
GabpaQ00422 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.45□□□□□ -0.26
GabpaQ00422 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.45□□□□□ -0.26
GabpaQ00422 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.45□□□□□ -0.26
GabpaQ00422 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
GabpaQ00422 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
GabpaQ00422 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GabpaQ00422 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
GabpaQ00422 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
GabpaQ00422 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms