Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Gm12241-201ENSMUST00000118330 726 ntBASIC11.07□□□□□ -0.64
SgcdP82347 Gm23363-201ENSMUST00000175024 79 ntBASIC11.07□□□□□ -0.64
SgcdP82347 Gm27682-201ENSMUST00000183930 110 ntBASIC11.07□□□□□ -0.64
SgcdP82347 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.07□□□□□ -0.64
SgcdP82347 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.07□□□□□ -0.64
SgcdP82347 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Mir433-201ENSMUST00000093564 124 ntBASIC11.07□□□□□ -0.64
SgcdP82347 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SgcdP82347 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.07□□□□□ -0.64
SgcdP82347 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SgcdP82347 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SgcdP82347 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.06□□□□□ -0.64
SgcdP82347 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Gm22018-201ENSMUST00000104357 131 ntBASIC11.06□□□□□ -0.64
SgcdP82347 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.06□□□□□ -0.64
SgcdP82347 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.06□□□□□ -0.64
SgcdP82347 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.06□□□□□ -0.64
SgcdP82347 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
SgcdP82347 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.06□□□□□ -0.64
SgcdP82347 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.06□□□□□ -0.64
SgcdP82347 Gm18753-201ENSMUST00000201000 566 ntBASIC11.06□□□□□ -0.64
SgcdP82347 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
SgcdP82347 Gm10608-202ENSMUST00000213924 676 ntBASIC11.06□□□□□ -0.64
SgcdP82347 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.06□□□□□ -0.64
SgcdP82347 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SgcdP82347 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.06□□□□□ -0.64
SgcdP82347 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcdP82347 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.05□□□□□ -0.64
SgcdP82347 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SgcdP82347 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
SgcdP82347 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.05□□□□□ -0.64
SgcdP82347 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.05□□□□□ -0.64
SgcdP82347 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcdP82347 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms