Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.35□□□□□ -0.59
Cdkn2bP55271 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdkn2bP55271 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.34□□□□□ -0.59
Cdkn2bP55271 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.34□□□□□ -0.59
Cdkn2bP55271 Morn2-202ENSMUST00000227729 656 ntBASIC11.34□□□□□ -0.59
Cdkn2bP55271 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdkn2bP55271 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdkn2bP55271 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Cdkn2bP55271 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.33□□□□□ -0.6
Cdkn2bP55271 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.33□□□□□ -0.6
Cdkn2bP55271 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Gm11989-201ENSMUST00000117240 672 ntBASIC11.33□□□□□ -0.6
Cdkn2bP55271 Gm11362-201ENSMUST00000118838 850 ntBASIC11.33□□□□□ -0.6
Cdkn2bP55271 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Gm9230-201ENSMUST00000188228 532 ntBASIC11.33□□□□□ -0.6
Cdkn2bP55271 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Gm6013-201ENSMUST00000212264 699 ntBASIC11.33□□□□□ -0.6
Cdkn2bP55271 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdkn2bP55271 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms