Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.06□□□□□ -0.48
PdgfrbP05622 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm13665-201ENSMUST00000120830 528 ntBASIC12.06□□□□□ -0.48
PdgfrbP05622 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.06□□□□□ -0.48
PdgfrbP05622 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.06□□□□□ -0.48
PdgfrbP05622 Mir6420-201ENSMUST00000185032 102 ntBASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm36943-201ENSMUST00000194422 282 ntBASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm44262-201ENSMUST00000204969 372 ntBASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.06□□□□□ -0.48
PdgfrbP05622 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.06□□□□□ -0.48
PdgfrbP05622 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.06□□□□□ -0.48
PdgfrbP05622 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.06□□□□□ -0.48
PdgfrbP05622 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdgfrbP05622 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Paupar-201ENSMUST00000194826 3482 ntBASIC12.05□□□□□ -0.48
PdgfrbP05622 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.05□□□□□ -0.48
PdgfrbP05622 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.05□□□□□ -0.48
PdgfrbP05622 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.05□□□□□ -0.48
PdgfrbP05622 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
PdgfrbP05622 Gm14539-201ENSMUST00000117527 174 ntBASIC12.05□□□□□ -0.48
PdgfrbP05622 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.05□□□□□ -0.48
PdgfrbP05622 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.05□□□□□ -0.48
PdgfrbP05622 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.05□□□□□ -0.48
PdgfrbP05622 Gm26083-201ENSMUST00000157904 193 ntBASIC12.05□□□□□ -0.48
PdgfrbP05622 Gm26361-201ENSMUST00000158868 186 ntBASIC12.05□□□□□ -0.48
PdgfrbP05622 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.05□□□□□ -0.48
PdgfrbP05622 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdgfrbP05622 Gm45610-201ENSMUST00000209227 784 ntBASIC12.05□□□□□ -0.48
PdgfrbP05622 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.05□□□□□ -0.48
PdgfrbP05622 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms