Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PrnpP04925 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.29□□□□□ -0.44
PrnpP04925 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.29□□□□□ -0.44
PrnpP04925 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
PrnpP04925 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
PrnpP04925 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PrnpP04925 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PrnpP04925 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PrnpP04925 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.28□□□□□ -0.44
PrnpP04925 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PrnpP04925 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Gm14441-201ENSMUST00000121960 540 ntBASIC12.28□□□□□ -0.44
PrnpP04925 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.28□□□□□ -0.44
PrnpP04925 Gm23218-201ENSMUST00000158124 276 ntBASIC12.28□□□□□ -0.44
PrnpP04925 Gm7741-201ENSMUST00000181445 989 ntBASIC12.28□□□□□ -0.44
PrnpP04925 Mir8093-201ENSMUST00000185043 137 ntBASIC12.28□□□□□ -0.44
PrnpP04925 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.28□□□□□ -0.44
PrnpP04925 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.28□□□□□ -0.44
PrnpP04925 Gm44124-201ENSMUST00000204159 472 ntBASIC12.28□□□□□ -0.44
PrnpP04925 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.28□□□□□ -0.44
PrnpP04925 Gm9139-201ENSMUST00000218817 700 ntBASIC12.28□□□□□ -0.44
PrnpP04925 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
PrnpP04925 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.28□□□□□ -0.44
PrnpP04925 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PrnpP04925 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.28□□□□□ -0.44
PrnpP04925 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PrnpP04925 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.28□□□□□ -0.44
PrnpP04925 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrnpP04925 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
PrnpP04925 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrnpP04925 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
PrnpP04925 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
PrnpP04925 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrnpP04925 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.27□□□□□ -0.44
PrnpP04925 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrnpP04925 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrnpP04925 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PrnpP04925 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.27□□□□□ -0.45
PrnpP04925 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.45
PrnpP04925 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.27□□□□□ -0.45
PrnpP04925 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.27□□□□□ -0.45
PrnpP04925 Mir6407-201ENSMUST00000184510 101 ntBASIC12.27□□□□□ -0.45
PrnpP04925 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.27□□□□□ -0.45
PrnpP04925 Gm5982-201ENSMUST00000196234 512 ntBASIC12.27□□□□□ -0.45
PrnpP04925 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.27□□□□□ -0.45
PrnpP04925 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.27□□□□□ -0.45
PrnpP04925 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.27□□□□□ -0.45
PrnpP04925 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PrnpP04925 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.27□□□□□ -0.45
PrnpP04925 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms