Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 AL035252.4-201ENST00000624174 288 ntBASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPARGC1AQ9UBK2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 MSTO2P-201ENST00000314835 1709 ntBASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 KRT8P35-201ENST00000483942 1338 ntBASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 AC106886.1-201ENST00000568660 600 ntBASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 BTNL10-201ENST00000595971 695 ntBASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 AC233724.13-201ENST00000598383 410 ntBASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PPARGC1AQ9UBK2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PPARGC1AQ9UBK2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PPARGC1AQ9UBK2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PPARGC1AQ9UBK2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PPARGC1AQ9UBK2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PPARGC1AQ9UBK2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PPARGC1AQ9UBK2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
PPARGC1AQ9UBK2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 AC104581.4-201ENST00000623126 3052 ntBASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 TMEM14DP-201ENST00000422205 345 ntBASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 AC022616.1-201ENST00000518688 554 ntBASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 DUX4L47-201ENST00000566374 394 ntBASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 ZBED1P1-201ENST00000502364 1930 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms