Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm8410-201ENSMUST00000117225 605 ntBASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm15240-201ENSMUST00000118156 720 ntBASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm12485-201ENSMUST00000119641 291 ntBASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm18889-201ENSMUST00000174284 929 ntBASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco4Q9JIS3 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms