Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Gm17980-201ENSMUST00000217977 2349 ntBASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.99□□□□□ -0.33
Ssr1Q9CY50 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Rgr-203ENSMUST00000225070 4704 ntBASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Gm13829-201ENSMUST00000119600 138 ntBASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Gm4986-201ENSMUST00000119731 549 ntBASIC12.98□□□□□ -0.33
Ssr1Q9CY50 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Gm5370-201ENSMUST00000187187 574 ntBASIC12.98□□□□□ -0.33
Ssr1Q9CY50 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssr1Q9CY50 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Gm18187-201ENSMUST00000196476 984 ntBASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms