Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gm18642-201ENSMUST00000206642 1400 ntBASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gm14497-201ENSMUST00000119537 580 ntBASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gm16459-201ENSMUST00000121443 686 ntBASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gm10807-201ENSMUST00000177134 795 ntBASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gm4895-201ENSMUST00000181646 1137 ntBASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gm19015-201ENSMUST00000184002 1189 ntBASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gm45094-201ENSMUST00000207013 617 ntBASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx54Q8K4L0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Mir453-201ENSMUST00000104732 82 ntBASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Gm14395-201ENSMUST00000120494 563 ntBASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Mir6953-201ENSMUST00000184745 68 ntBASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Gm4034-201ENSMUST00000187674 480 ntBASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 AC164087.2-201ENSMUST00000216206 1072 ntBASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx54Q8K4L0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.49■□□□□ 0.07
Ddx54Q8K4L0 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms