Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Gm11511-201ENSMUST00000118146 540 ntBASIC11.22□□□□□ -0.61
Clrn1Q8K445 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.22□□□□□ -0.61
Clrn1Q8K445 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.22□□□□□ -0.61
Clrn1Q8K445 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.22□□□□□ -0.61
Clrn1Q8K445 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Clrn1Q8K445 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm22133-201ENSMUST00000102082 109 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Mir877-201ENSMUST00000104738 85 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm29615-201ENSMUST00000185371 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm28224-201ENSMUST00000186078 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm29001-201ENSMUST00000186177 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm28292-201ENSMUST00000186593 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm28101-201ENSMUST00000187608 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm29076-201ENSMUST00000187689 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm28302-201ENSMUST00000187931 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm28646-201ENSMUST00000188220 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm28205-201ENSMUST00000189177 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm29032-201ENSMUST00000189797 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm28695-201ENSMUST00000190300 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm38241-201ENSMUST00000192641 898 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm37448-201ENSMUST00000192795 697 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm35960-201ENSMUST00000202712 767 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Gm8913-201ENSMUST00000209491 641 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.21□□□□□ -0.61
Clrn1Q8K445 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clrn1Q8K445 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.21□□□□□ -0.61
Clrn1Q8K445 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.21□□□□□ -0.62
Clrn1Q8K445 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.21□□□□□ -0.62
Clrn1Q8K445 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.21□□□□□ -0.62
Clrn1Q8K445 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.21□□□□□ -0.62
Clrn1Q8K445 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.21□□□□□ -0.62
Clrn1Q8K445 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clrn1Q8K445 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Clrn1Q8K445 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms