Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Cog3-203ENSMUST00000227473 4197 ntBASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3tc2Q80VA5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Gm27177-202ENSMUST00000183514 2703 ntBASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Gm4735-201ENSMUST00000138679 1302 ntBASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Gm5855-201ENSMUST00000200240 1305 ntBASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Gm14760-201ENSMUST00000121831 999 ntBASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Gm42629-201ENSMUST00000199063 1102 ntBASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Gm3793-201ENSMUST00000204973 672 ntBASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3tc2Q80VA5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Gm11451-201ENSMUST00000118946 630 ntBASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Gm15595-201ENSMUST00000120840 961 ntBASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Gm13182-201ENSMUST00000122241 312 ntBASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Gm6485-201ENSMUST00000160676 439 ntBASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3tc2Q80VA5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3tc2Q80VA5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3tc2Q80VA5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sh3tc2Q80VA5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.98□□□□□ -0.33
Sh3tc2Q80VA5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3tc2Q80VA5 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.98□□□□□ -0.33
Sh3tc2Q80VA5 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sh3tc2Q80VA5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms