Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rad54bQ6PFE3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Gm19187-201ENSMUST00000206781 892 ntBASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Gm10312-201ENSMUST00000078515 489 ntBASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rad54bQ6PFE3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Gm19287-201ENSMUST00000203190 358 ntBASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rad54bQ6PFE3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Rad54bQ6PFE3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rad54bQ6PFE3 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.96□□□□□ -0.5
Rad54bQ6PFE3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.96□□□□□ -0.5
Rad54bQ6PFE3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rad54bQ6PFE3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rad54bQ6PFE3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.95□□□□□ -0.5
Rad54bQ6PFE3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.95□□□□□ -0.5
Rad54bQ6PFE3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rad54bQ6PFE3 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.95□□□□□ -0.5
Rad54bQ6PFE3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rad54bQ6PFE3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms