Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Six4Q61321 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Six4Q61321 Gm12196-201ENSMUST00000120954 262 ntBASIC11.99□□□□□ -0.49
Six4Q61321 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Six4Q61321 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Gm25881-201ENSMUST00000157783 103 ntBASIC11.99□□□□□ -0.49
Six4Q61321 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.99□□□□□ -0.49
Six4Q61321 Gm25732-201ENSMUST00000175168 60 ntBASIC11.99□□□□□ -0.49
Six4Q61321 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.99□□□□□ -0.49
Six4Q61321 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.99□□□□□ -0.49
Six4Q61321 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.99□□□□□ -0.49
Six4Q61321 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Six4Q61321 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six4Q61321 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Six4Q61321 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Six4Q61321 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Six4Q61321 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Gm12266-201ENSMUST00000120311 962 ntBASIC11.98□□□□□ -0.49
Six4Q61321 Gm11960-201ENSMUST00000122068 925 ntBASIC11.98□□□□□ -0.49
Six4Q61321 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.98□□□□□ -0.49
Six4Q61321 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Six4Q61321 Mir6927-201ENSMUST00000184494 71 ntBASIC11.98□□□□□ -0.49
Six4Q61321 AU022133-201ENSMUST00000200601 873 ntBASIC11.98□□□□□ -0.49
Six4Q61321 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.98□□□□□ -0.49
Six4Q61321 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Six4Q61321 Gm5363-201ENSMUST00000211927 938 ntBASIC11.98□□□□□ -0.49
Six4Q61321 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.98□□□□□ -0.49
Six4Q61321 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.98□□□□□ -0.49
Six4Q61321 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Six4Q61321 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six4Q61321 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Six4Q61321 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.97□□□□□ -0.49
Six4Q61321 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.97□□□□□ -0.49
Six4Q61321 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Six4Q61321 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Six4Q61321 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Six4Q61321 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.97□□□□□ -0.49
Six4Q61321 Gm8566-201ENSMUST00000120174 465 ntBASIC11.97□□□□□ -0.49
Six4Q61321 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms