Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Gm12030-201ENSMUST00000121917 223 ntBASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.37□□□□□ -0.27
Srrm1Q52KI8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Srrm1Q52KI8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Gm5257-201ENSMUST00000121823 790 ntBASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Srrm1Q52KI8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Gm12419-201ENSMUST00000116649 636 ntBASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Gm14247-201ENSMUST00000120950 237 ntBASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Gm11660-201ENSMUST00000120955 412 ntBASIC13.35□□□□□ -0.27
Srrm1Q52KI8 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.35□□□□□ -0.27
Srrm1Q52KI8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm1Q52KI8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms