Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm28745-201ENSMUST00000190069 305 ntBASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm37720-201ENSMUST00000195497 1241 ntBASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rc3h1Q4VGL6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rc3h1Q4VGL6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rc3h1Q4VGL6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Rc3h1Q4VGL6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rc3h1Q4VGL6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rc3h1Q4VGL6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Gm12036-201ENSMUST00000120008 530 ntBASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Gm14441-201ENSMUST00000121960 540 ntBASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Gm2553-201ENSMUST00000215986 605 ntBASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rc3h1Q4VGL6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm7666-201ENSMUST00000146631 819 ntBASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm17391-201ENSMUST00000171036 126 ntBASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm18367-201ENSMUST00000176139 600 ntBASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm9540-201ENSMUST00000188230 478 ntBASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm6450-201ENSMUST00000200896 574 ntBASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm42599-201ENSMUST00000201308 469 ntBASIC13.76□□□□□ -0.21
Rc3h1Q4VGL6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms