Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Nkx2-6P43688 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-6P43688 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-6P43688 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.27□□□□□ -0.6
Nkx2-6P43688 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-6P43688 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-6P43688 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-6P43688 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm8737-201ENSMUST00000122208 642 ntBASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm5706-201ENSMUST00000181525 993 ntBASIC11.27□□□□□ -0.61
Nkx2-6P43688 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.27□□□□□ -0.61
Nkx2-6P43688 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.27□□□□□ -0.61
Nkx2-6P43688 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nkx2-6P43688 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.26□□□□□ -0.61
Nkx2-6P43688 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm27438-201ENSMUST00000183480 110 ntBASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm4034-201ENSMUST00000187674 480 ntBASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm9540-201ENSMUST00000188230 478 ntBASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm5714-201ENSMUST00000197343 566 ntBASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm45219-201ENSMUST00000205602 465 ntBASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm2553-201ENSMUST00000215986 605 ntBASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm10752-201ENSMUST00000218348 729 ntBASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms