Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
VtnP29788 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VtnP29788 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
VtnP29788 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.81□□□□□ -0.68
VtnP29788 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VtnP29788 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
VtnP29788 Gm14263-201ENSMUST00000117955 746 ntBASIC10.81□□□□□ -0.68
VtnP29788 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.81□□□□□ -0.68
VtnP29788 Gm12036-201ENSMUST00000120008 530 ntBASIC10.81□□□□□ -0.68
VtnP29788 Gm5523-201ENSMUST00000180415 997 ntBASIC10.81□□□□□ -0.68
VtnP29788 Gm18893-201ENSMUST00000198416 943 ntBASIC10.81□□□□□ -0.68
VtnP29788 Gm44100-201ENSMUST00000204329 436 ntBASIC10.81□□□□□ -0.68
VtnP29788 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.81□□□□□ -0.68
VtnP29788 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
VtnP29788 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.81□□□□□ -0.68
VtnP29788 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.8□□□□□ -0.68
VtnP29788 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.8□□□□□ -0.68
VtnP29788 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Gm22133-201ENSMUST00000102082 109 ntBASIC10.8□□□□□ -0.68
VtnP29788 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
VtnP29788 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Gm12380-201ENSMUST00000119012 544 ntBASIC10.8□□□□□ -0.68
VtnP29788 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Gm23699-201ENSMUST00000158835 135 ntBASIC10.8□□□□□ -0.68
VtnP29788 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
VtnP29788 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.8□□□□□ -0.68
VtnP29788 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.8□□□□□ -0.68
VtnP29788 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
VtnP29788 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
VtnP29788 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.79□□□□□ -0.68
VtnP29788 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VtnP29788 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
VtnP29788 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.79□□□□□ -0.68
VtnP29788 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
VtnP29788 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.79□□□□□ -0.68
VtnP29788 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.79□□□□□ -0.68
VtnP29788 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.79□□□□□ -0.68
VtnP29788 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.79□□□□□ -0.68
VtnP29788 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.79□□□□□ -0.68
VtnP29788 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.79□□□□□ -0.68
VtnP29788 Gm5616-201ENSMUST00000165252 384 ntBASIC10.79□□□□□ -0.68
VtnP29788 Gm17040-202ENSMUST00000170597 889 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms